Collection of 5 putative CSD human TFs out of 8 considered proteins
DBD Alignment (Click to open/enlarge)
No Structure and Description available
| Ensembl ID | HGNC symbol | DBD Family | Is TF? | TF Assessment | Binding Mode | Motif Status | Notes | Comments |
|---|---|---|---|---|---|---|---|---|
| CARHSP1 | CSD | No | ssDNA/RNA binding | 4 Not a DNA binding protein | No motif | RNA-binding protein (PMID: 11842224; PMID: 21078874) | ||
| CSDC2 | CSD | No | ssDNA/RNA binding | 4 Not a DNA binding protein | No motif | RNA-binding protein (PMID: 12801884) | ||
| CSDE1 | CSD | No | ssDNA/RNA binding | 4 Not a DNA binding protein | No motif | Established RNA-binding protein. | ||
| LIN28A | CSD | Yes | Inferred motif | 1 Monomer or homomultimer | High-throughput in vitro | Might also bind RNA | ||
| LIN28B | CSD | Yes | Known motif | 1 Monomer or homomultimer | High-throughput in vitro | Structure (PDB: 4A75) is with single stranded DNA. | ||
| YBX1 | CSD | Yes | Known motif | 1 Monomer or homomultimer | High-throughput in vitro | Might also bind RNA | ||
| YBX2 | CSD | Yes | Inferred motif | 1 Monomer or homomultimer | High-throughput in vitro | Might also bind RNA | ||
| YBX3 | CSD | Yes | Known motif | 1 Monomer or homomultimer | 100 perc ID - in vitro | Identical DBD to YBX1. Might also bind RNA. |