TF Info Page for DRAP1 (Unknown)
Conclusion
| Assessment | Binding Mode | Motif Status | Notes | Comments |
|---|---|---|---|---|
| Likely to be sequence specific TF | 2 Obligate heteromer | No motif | Based on structure (PDB: 1JFI), it forms the obligate heterodimer DR1-DRAP1 that furthermore contacts TBP. Only makes contact with the minor groove in a histone-like interaction, which is probably non-specific (PMID: 11461703) |
Description
| Description: | DR1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:3019] | |
| Entrez Summary | TBA | |
| Ensembl ID: | ENSG00000175550 | |
| External Link: | ||
| Interpro | IPR003958; IPR009072; | |
| Protein Domain: | ||
| Protein: ENSP00000307850 | DBD: Other | Other: CBFD_NFYB_HMF, FXMRP1_C_core, Histone |
| Protein: ENSP00000432445 | DBD: Other | Other: CBFD_NFYB_HMF, FXMRP1_C_core |
Previous Annotations
| Source | Annotation |
| TF-CAT classification |
TF Gene_Transcription Factor Binding tf co-factor binding_TF PPI_ PMIDS:12471260 |
| Vaquerizas 2009 TF classification "a" Has direct evidence of TF function; "b" Has evidence for an orthologous TF; "c" contains likely DBDs, but has no functional evidence; "x" is an unlikely TF such as predicted gene, genes with likely non-specific DBDs or that have function outside transcription; "other" category contains proteins without clear DBDs they curated from external sources. |
b |
| CisBP considers it as a TF? | No |
| TFclass considers it as a TF? | No |
| Has GO:0003700 "transcription factor activity, sequence-specific DNA binding" | Yes |
| GO-Info |
GO:0003700 sequence-specific DNA binding transcription factor activity TAS - PMID:8608938 |
|
Initial Assessment
1a1 Protein has a high confidence PWM (HT-SELEX, PBM or B1H model) or there is a crystal structure that supports sequence specific DNA binding; 1a2 There is high confidence data for a close ortholog (as defined in CisBP); 2a1 There is lower confidence direct evidence, such as a Jaspar, Hocomoco or Transfac model; 2a2 There is lower confidence evidence for an close ortholog; 3a There is decent circumstantial evidence for its role as a TF or not; 4a Two or more datasets predict it as a TF; 5a One of the source datasets predicts is as a TF |
3a, decent circumstantial evidence for its role as |
| TF has conditional DNA-binding requirements | Obligate heteromultimer, with at least DR1 and als |