get eID ENSG00000163497 else done selects

TF Info Page for FEV (Ets)

Conclusion

Assessment Binding Mode Motif Status Notes Comments
Known motif 1 Monomer or homomultimer High-throughput in vitro

Description

Description: FEV, ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:18562]
Entrez Summary TBA
Ensembl ID: ENSG00000163497
External Link:
Interpro IPR000418; ;
Protein Domain:
Protein: ENSP00000295727DBD: ETSOther:

Previous Annotations

Source Annotation
TF-CAT classification TF Gene_DNA-Binding
sequence-specific_DNA Binding
Transactivation_
PMIDS:9468386
Vaquerizas 2009 TF classification
"a" Has direct evidence of TF function;
"b" Has evidence for an orthologous TF;
"c" contains likely DBDs, but has no functional evidence;
"x" is an unlikely TF such as predicted gene, genes with likely non-specific DBDs or that have function outside transcription;
"other" category contains proteins without clear DBDs they curated from external sources. 		a
CisBP considers it as a TF? Yes
TFclass considers it as a TF? Yes
Has GO:0003700 "transcription factor activity, sequence-specific DNA binding" Yes
GO-Info GO:0000981
sequence-specific DNA binding RNA polymerase II transcription factor activity
IBA - GO_REF:0000033
GO:0003700
sequence-specific DNA binding transcription factor activity
TAS - PMID:9121764
Initial Assessment
1a1 Protein has a high confidence PWM (HT-SELEX, PBM or B1H model) or there is a crystal structure that supports sequence specific DNA binding;
1a2 There is high confidence data for a close ortholog (as defined in CisBP);
2a1 There is lower confidence direct evidence, such as a Jaspar, Hocomoco or Transfac model;
2a2 There is lower confidence evidence for an close ortholog;
3a There is decent circumstantial evidence for its role as a TF or not;
4a Two or more datasets predict it as a TF;
5a One of the source datasets predicts is as a TF 		1a1, Direct HQ evidence
TF has conditional DNA-binding requirements

DNA-Binding

Published Motif Data

Source Annotation Motif Evidence
HT-SELEXJolma2013Direct
HT-SELEXYin2017Direct
Methyl-HT-SELEXYin2017Direct
MiscHocoMocoDirect
HT-SELEXNitta2015Inferred - Ets65A (88% AA Identity, Drosophila melanogaster)
SMiLE-seqIsakova2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - FLI1 (88% AA Identity, Homo sapiens)
PBMWei10Inferred - Fli1 (88% AA Identity, Mus musculus)
SELEXJASPARInferred - FLI1 (88% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - FLI1 (88% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - FLI1 (88% AA Identity, Homo sapiens)
MiscHocoMocoInferred - FLI1 (88% AA Identity, Homo sapiens)
MiscHOMERInferred - Fli1 (88% AA Identity, Mus musculus)
HT-SELEXJolma2010Inferred - ERG (86% AA Identity, Homo sapiens)
HT-SELEXJolma2010Inferred - ERG (86% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ERG (86% AA Identity, Homo sapiens)
PBMWei10Inferred - Erg (86% AA Identity, Mus musculus)
SELEXJASPARInferred - ERG (86% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ERG (86% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ERG (86% AA Identity, Homo sapiens)
MiscHocoMocoInferred - ERG (86% AA Identity, Homo sapiens)
MiscHOMERInferred - ERG (86% AA Identity, Homo sapiens)
HT-SELEXNitta2015Inferred - Ets21C (85% AA Identity, Drosophila melanogaster)
PBMZoo_01Inferred - Ets21C (85% AA Identity, Drosophila melanogaster)
HT-SELEXNitta2015Inferred - pnt (65% AA Identity, Drosophila melanogaster)
PBMWei10Inferred - Ets1 (64% AA Identity, Mus musculus)
TransfacTransfacLicense requiredInferred - ETS1B_CHICK (64% AA Identity, Gallus gallus)
HT-SELEXYin2017Inferred - ETV5 (59% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV5 (59% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV5 (59% AA Identity, Homo sapiens)
PBMWei10Inferred - Etv5 (59% AA Identity, Mus musculus)
MiscHocoMocoInferred - ETV5 (59% AA Identity, Homo sapiens)
HT-SELEXNitta2015Inferred - Ets96B (57% AA Identity, Drosophila melanogaster)
HT-SELEXYin2017Inferred - ETV1 (57% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ETV1 (57% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV1 (57% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV1 (57% AA Identity, Homo sapiens)
PBMWei10Inferred - Etv1 (57% AA Identity, Mus musculus)
PBMWei10Inferred - Etv1 (57% AA Identity, Mus musculus)
HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV4 (57% AA Identity, Homo sapiens)
PBMWei10Inferred - Etv4 (57% AA Identity, Mus musculus)
TransfacTransfacLicense requiredInferred - ETV4 (57% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ETV4 (57% AA Identity, Homo sapiens)
MiscHOMERInferred - ETV1 (57% AA Identity, Homo sapiens)
MiscHocoMocoInferred - ETV4 (57% AA Identity, Homo sapiens)
PBMZoo_01Inferred - elk4 (56% AA Identity, Tetraodon nigroviridis)
SMiLE-seqIsakova2017Inferred - GABPA (55% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - GABPA (55% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - GABPA (55% AA Identity, Homo sapiens)
PBMBadis09Inferred - Gabpa (55% AA Identity, Mus musculus)
PBMWei10Inferred - Gabpa (55% AA Identity, Mus musculus)
ChIP-seqENCODEInferred - GABPA (55% AA Identity, Homo sapiens)
ChIP-seqENCODEInferred - GABPA (55% AA Identity, Homo sapiens)
ChIP-seqENCODEInferred - GABPA (55% AA Identity, Homo sapiens)
ChIP-seqENCODEInferred - GABPA (55% AA Identity, Homo sapiens)
ChIP-seqENCODEInferred - GABPA (55% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - GABPA (55% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - GABPA (55% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - GABPA (55% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - GABPA (55% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - GABPA (55% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - GABPA (55% AA Identity, Homo sapiens)
ChIP-seqJASPARInferred - Gabpa (55% AA Identity, Mus musculus)
MiscHocoMocoInferred - GABPA (55% AA Identity, Homo sapiens)
MiscHOMERInferred - GABPA (55% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ELK1 (54% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ELK1 (54% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ELK1 (54% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ELK1 (54% AA Identity, Homo sapiens)
PBMWei10Inferred - Elk1 (54% AA Identity, Mus musculus)
HT-SELEXYin2017Inferred - ETV2 (54% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV2 (54% AA Identity, Homo sapiens)
PBMWei10Inferred - XP_911724.4 (54% AA Identity, Mus musculus)
SELEXJASPARInferred - ELK1 (54% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ELK1 (54% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ELK1 (54% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ELK1 (54% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ELK1 (54% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ELK1 (54% AA Identity, Homo sapiens)
TransfacTransfacLicense requiredInferred - ETV2 (54% AA Identity, Homo sapiens)
MiscHocoMocoInferred - ELK1 (54% AA Identity, Homo sapiens)
MiscHOMERInferred - ELK1 (54% AA Identity, Homo sapiens)
PBMWei10Inferred - Elk4 (53% AA Identity, Mus musculus)
HT-SELEXYin2017Inferred - ETV3 (53% AA Identity, Homo sapiens)
HT-SELEXYin2017Inferred - ETV3 (53% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV3 (53% AA Identity, Homo sapiens)
Methyl-HT-SELEXYin2017Inferred - ETV3 (53% AA Identity, Homo sapiens)
PBMWei10Inferred - Etv3 (53% AA Identity, Mus musculus)

Structure

Structure PDB 3ZP5

Experimental History

Method Constructs
Tried in PBM?
(Whether the protein was tried in PBM or not)
Tried in HT-SELEX
(Whether the protein was tried in HT-SELEX or not, and if so, then what kind of clones were tested)
Other Information?
(Tried with another method and failed?)

External Contribution